Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | EZ449_09085 | Not Available | Positive | 2183091 - 2183546 | 18170.5 |
| penicillin-binding protein 1c | EZ449_09090 | Not Available | Positive | 2184000 - 2186381 | 89164.2 |
| lysoplasmalogenase | EZ449_09095 | Not Available | Negative | 2186651 - 2187343 | 26322.4 |
| sterol desaturase family protein | EZ449_09100 | Not Available | Negative | 2187333 - 2188550 | 47689.0 |
| hypothetical protein | EZ449_09105 | Not Available | Positive | 2188738 - 2189088 | 12833.0 |
| very short patch repair endonuclease | EZ449_09110 | Not Available | Negative | 2189148 - 2189651 | 19697.0 |
| cold-shock protein | EZ449_09115 | Not Available | Negative | 2189945 - 2190148 | 7464.76 |
| phosphatase pap2 family protein | EZ449_09120 | Not Available | Positive | 2190309 - 2190953 | 24598.0 |
| crp/fnr family transcriptional regulator | EZ449_09125 | Not Available | Negative | 2190950 - 2191555 | 23287.2 |
| had family phosphatase | EZ449_09130 | Not Available | Positive | 2191724 - 2192386 | 24719.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

