Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | EZ449_09035 | Not Available | Negative | 2165458 - 2166936 | 55070.2 |
| beta-glucuronidase | EZ449_09040 | Not Available | Negative | 2167324 - 2169153 | 70384.5 |
| marr family transcriptional regulator | EZ449_09045 | Not Available | Positive | 2169530 - 2169973 | 17040.8 |
| mbl fold metallo-hydrolase | EZ449_09050 | Not Available | Positive | 2170020 - 2170856 | 31148.0 |
| aquaporin z | EZ449_09055 | Not Available | Positive | 2171224 - 2171931 | 24093.9 |
| glutathione peroxidase | EZ449_09060 | Not Available | Negative | 2172099 - 2172614 | 19475.6 |
| type i dna topoisomerase | EZ449_09065 | Not Available | Positive | 2173094 - 2175670 | 96687.0 |
| hypothetical protein | EZ449_09070 | Not Available | Positive | 2175813 - 2176217 | 15203.5 |
| nuclear transport factor 2 family protein | EZ449_09075 | Not Available | Negative | 2176303 - 2176725 | 15626.2 |
| hypothetical protein | EZ449_09080 | Not Available | Positive | 2177031 - 2182631 | 207483.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

