Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EZ449_00780 | Not Available | Positive | 199598 - 200677 | 39297.9 |
| sulfurtransferase | EZ449_00785 | Not Available | Positive | 200975 - 201814 | 30604.4 |
| duf177 domain-containing protein | EZ449_00790 | Not Available | Positive | 202216 - 202746 | 20355.3 |
| 50s ribosomal protein l32 | EZ449_00795 | Not Available | Positive | 202762 - 202953 | 7138.61 |
| phosphate acyltransferase plsx | EZ449_00800 | Not Available | Positive | 203055 - 203993 | 33548.1 |
| ketoacyl-acp synthase iii | EZ449_00805 | Not Available | Positive | 204012 - 205010 | 35902.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | EZ449_00810 | Not Available | Positive | 205180 - 205656 | 17068.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | EZ449_00815 | Not Available | Positive | 205768 - 207111 | 49590.4 |
| hypothetical protein | EZ449_00820 | Not Available | Positive | 207514 - 208722 | 44628.7 |
| twin-arginine translocase subunit tatc | EZ449_00825 | Not Available | Positive | 208904 - 209788 | 33022.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

