Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | EZ449_08935 | Not Available | Positive | 2139540 - 2140538 | 37536.8 |
| deoxynucleoside kinase | EZ449_08940 | Not Available | Positive | 2140652 - 2141266 | 23781.2 |
| hypothetical protein | EZ449_08945 | Not Available | Positive | 2141333 - 2141530 | 7994.69 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EZ449_08950 | Not Available | Positive | 2141534 - 2142322 | 29575.6 |
| hypothetical protein | EZ449_08955 | Not Available | Positive | 2142590 - 2143135 | 20787.0 |
| hypothetical protein | EZ449_08960 | Not Available | Positive | 2143194 - 2144327 | 43669.3 |
| fic family protein | EZ449_08965 | Not Available | Negative | 2144470 - 2145591 | 43192.7 |
| ctp synthase | EZ449_08970 | Not Available | Positive | 2146007 - 2147623 | 60093.6 |
| membrane protein insertase yidc | EZ449_08975 | Not Available | Positive | 2147645 - 2149447 | 68051.8 |
| s9 family peptidase | EZ449_08980 | Not Available | Positive | 2149763 - 2152621 | 107229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

