Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_08830 | Not Available | Positive | 2122163 - 2123263 | 43132.6 |
| response regulator transcription factor | EZ449_08835 | Not Available | Positive | 2123414 - 2124172 | 28434.3 |
| response regulator | EZ449_08840 | Not Available | Positive | 2124293 - 2124655 | 13925.9 |
| hypothetical protein | EZ449_08845 | Not Available | Positive | 2124667 - 2125296 | 22518.5 |
| dna polymerase iii subunit epsilon | EZ449_08850 | Not Available | Positive | 2125468 - 2126841 | 51853.5 |
| mmcq/yjbr family dna-binding protein | EZ449_08855 | Not Available | Positive | 2126965 - 2127303 | 12730.2 |
| extradiol dioxygenase | EZ449_08860 | Not Available | Positive | 2127401 - 2127817 | 15275.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | EZ449_08870 | Not Available | Negative | 2128320 - 2129624 | 48485.4 |
| nudix domain-containing protein | EZ449_08875 | Not Available | Negative | 2129636 - 2130076 | 16860.9 |
| cation transporter | EZ449_08880 | Not Available | Negative | 2130063 - 2131049 | 36986.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

