Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i and ii | EZ449_08780 | Not Available | Negative | 2115652 - 2116443 | 30024.0 |
| hypothetical protein | EZ449_08785 | Not Available | Negative | 2116554 - 2116742 | 6898.18 |
| hypothetical protein | EZ449_08790 | Not Available | Positive | 2116851 - 2117231 | 15120.7 |
| ktsc domain-containing protein | EZ449_08795 | Not Available | Positive | 2117258 - 2117461 | 7895.57 |
| endonuclease | EZ449_08800 | Not Available | Positive | 2117463 - 2118200 | 29053.5 |
| isopentenyl-diphosphate delta-isomerase | EZ449_08805 | Not Available | Negative | 2118422 - 2118931 | 19674.2 |
| phytoene/squalene synthase family protein | EZ449_08810 | Not Available | Negative | 2118936 - 2119772 | 32423.5 |
| merr family transcriptional regulator | EZ449_08815 | Not Available | Negative | 2119769 - 2120662 | 34240.3 |
| hypothetical protein | EZ449_08820 | Not Available | Negative | 2120756 - 2121034 | 10574.8 |
| response regulator transcription factor | EZ449_08825 | Not Available | Positive | 2121333 - 2122073 | 28250.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

