Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3857 domain-containing protein | EZ449_08730 | Not Available | Positive | 2101746 - 2103719 | 74670.5 |
| duf3857 domain-containing protein | EZ449_08735 | Not Available | Positive | 2103832 - 2105802 | 74819.3 |
| duf3857 domain-containing protein | EZ449_08740 | Not Available | Positive | 2105803 - 2107710 | 72333.0 |
| sdr family oxidoreductase | EZ449_08745 | Not Available | Negative | 2107853 - 2109301 | 54798.6 |
| murein l,d-transpeptidase catalytic domain family protein | EZ449_08750 | Not Available | Positive | 2109519 - 2110304 | 28899.2 |
| hypothetical protein | EZ449_08755 | Not Available | Negative | 2110301 - 2110744 | 16855.0 |
| dna topoisomerase iii | EZ449_08760 | Not Available | Positive | 2110908 - 2112758 | 69202.1 |
| response regulator | EZ449_08765 | Not Available | Negative | 2112755 - 2113132 | 14345.5 |
| duf2075 domain-containing protein | EZ449_08770 | Not Available | Negative | 2113318 - 2115231 | 71740.8 |
| duf3037 domain-containing protein | EZ449_08775 | Not Available | Negative | 2115291 - 2115674 | 14558.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

