Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EZ449_08590 | Not Available | Negative | 2063624 - 2065003 | 52039.5 |
| hypothetical protein | EZ449_08595 | Not Available | Negative | 2064970 - 2066319 | 52390.4 |
| hypothetical protein | EZ449_08600 | Not Available | Negative | 2066466 - 2070140 | 138869.0 |
| hypothetical protein | EZ449_08605 | Not Available | Negative | 2070152 - 2074090 | 149513.0 |
| hypothetical protein | EZ449_08610 | Not Available | Negative | 2074091 - 2077405 | 123298.0 |
| hypothetical protein | EZ449_08655 | Not Available | Negative | 2084883 - 2085989 | 40695.5 |
| duf4255 domain-containing protein | EZ449_08660 | Not Available | Negative | 2085989 - 2086594 | 22986.7 |
| duf1624 domain-containing protein | EZ449_08665 | Not Available | Positive | 2087070 - 2088257 | 45460.4 |
| aminoacetone oxidase family fad-binding enzyme | EZ449_08670 | Not Available | Negative | 2088307 - 2089497 | 43784.7 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EZ449_08675 | Not Available | Positive | 2089739 - 2090878 | 42413.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

