Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase | EZ449_08480 | Not Available | Negative | 2035930 - 2037327 | 52308.8 |
| transposase | EZ449_08495 | Not Available | Positive | 2037895 - 2038161 | 10236.3 |
| hypothetical protein | EZ449_08500 | Not Available | Negative | 2038435 - 2038686 | 9733.66 |
| hypothetical protein | EZ449_08505 | Not Available | Negative | 2038946 - 2040544 | 59101.5 |
| acyltransferase | EZ449_08510 | Not Available | Negative | 2040606 - 2041721 | 42070.7 |
| sdr family oxidoreductase | EZ449_08515 | Not Available | Negative | 2041990 - 2043057 | 39824.6 |
| crp/fnr family transcriptional regulator | EZ449_08520 | Not Available | Positive | 2043227 - 2043808 | 22197.1 |
| glycoside hydrolase family 2 | EZ449_08525 | Not Available | Negative | 2043820 - 2045646 | 68334.5 |
| sulfatase atsg | EZ449_08530 | Not Available | Negative | 2045650 - 2047086 | 54021.9 |
| glycoside hydrolase family 92 protein | EZ449_08535 | Not Available | Negative | 2047086 - 2049239 | 80736.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

