Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein a | EZ449_08325 | Not Available | Negative | 1994285 - 1994500 | 7806.83 |
| tonb-dependent receptor | EZ449_08330 | Not Available | Negative | 1994596 - 1997373 | 103081.0 |
| hypothetical protein | EZ449_08335 | Not Available | Negative | 1997546 - 2000365 | 103139.0 |
| glycine cleavage system protein h | EZ449_08340 | Not Available | Negative | 2000622 - 2001020 | 15562.4 |
| glycine cleavage system protein gcvh | EZ449_08345 | Not Available | Negative | 2001032 - 2001412 | 13833.2 |
| hypothetical protein | EZ449_08350 | Not Available | Positive | 2001722 - 2002177 | 17098.4 |
| cell surface protein spra | EZ449_08355 | Not Available | Negative | 2002539 - 2009720 | 268654.0 |
| holliday junction branch migration protein ruva | EZ449_08360 | Not Available | Negative | 2009732 - 2010316 | 21368.1 |
| nadp-dependent malic enzyme | EZ449_08365 | Not Available | Negative | 2010323 - 2012644 | 84674.1 |
| lysm peptidoglycan-binding domain-containing protein | EZ449_08370 | Not Available | Negative | 2013018 - 2014424 | 52580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

