Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | EZ449_08275 | Not Available | Positive | 1983792 - 1984235 | 16376.0 |
| 30s ribosomal protein s9 | EZ449_08280 | Not Available | Positive | 1984239 - 1984625 | 14144.3 |
| 30s ribosomal protein s2 | EZ449_08285 | Not Available | Positive | 1984644 - 1985504 | 31771.5 |
| elongation factor ts | EZ449_08290 | Not Available | Positive | 1985634 - 1986479 | 29687.5 |
| metallophosphoesterase family protein | EZ449_08295 | Not Available | Negative | 1987116 - 1988321 | 45537.5 |
| n-acetylglucosamine-6-phosphate deacetylase | EZ449_08300 | Not Available | Positive | 1988411 - 1989511 | 40351.8 |
| ump kinase | EZ449_08305 | Not Available | Positive | 1989572 - 1990276 | 25971.8 |
| ribosome recycling factor | EZ449_08310 | Not Available | Positive | 1990318 - 1990881 | 20782.1 |
| winged helix-turn-helix transcriptional regulator | EZ449_08315 | Not Available | Positive | 1991513 - 1991989 | 17914.9 |
| ferrous iron transport protein b | EZ449_08320 | Not Available | Negative | 1992166 - 1994274 | 78038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

