Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase uvrd | EZ449_08225 | Not Available | Positive | 1968797 - 1972060 | 123261.0 |
| pd-(d/e)xk nuclease family protein | EZ449_08230 | Not Available | Positive | 1972068 - 1974989 | 111801.0 |
| n-acetyltransferase | EZ449_08235 | Not Available | Positive | 1975183 - 1975740 | 21730.9 |
| hypothetical protein | EZ449_08240 | Not Available | Positive | 1975762 - 1975965 | 7978.43 |
| pyruvate dehydrogenase complex e1 component subunit beta | EZ449_08245 | Not Available | Positive | 1976224 - 1977210 | 35998.5 |
| hypothetical protein | EZ449_08250 | Not Available | Positive | 1977586 - 1977960 | 14337.5 |
| rna-binding transcriptional accessory protein | EZ449_08255 | Not Available | Positive | 1978315 - 1980606 | 84630.7 |
| mechanosensitive ion channel | EZ449_08260 | Not Available | Negative | 1980667 - 1981746 | 41515.9 |
| nicotinamide riboside transporter pnuc | EZ449_08265 | Not Available | Positive | 1981897 - 1982565 | 26209.8 |
| hypothetical protein | EZ449_08270 | Not Available | Negative | 1982765 - 1983571 | 30332.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

