Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_08175 | Not Available | Positive | 1959087 - 1959932 | 30720.8 |
| hit family protein | EZ449_08180 | Not Available | Negative | 1959987 - 1960388 | 14578.0 |
| transcription elongation factor grea | EZ449_08185 | Not Available | Negative | 1960476 - 1960949 | 17130.6 |
| m1 family peptidase | EZ449_08190 | Not Available | Positive | 1961247 - 1963127 | 70833.0 |
| osmc family peroxiredoxin | EZ449_08195 | Not Available | Negative | 1963288 - 1963764 | 17634.7 |
| glycoside hydrolase family 3 | EZ449_08200 | Not Available | Positive | 1964310 - 1965929 | 59359.1 |
| hypothetical protein | EZ449_08205 | Not Available | Positive | 1966203 - 1966415 | 8087.56 |
| duf255 domain-containing protein | EZ449_08210 | Not Available | Negative | 1966515 - 1967048 | 19624.5 |
| hydrolase tatd | EZ449_08215 | Not Available | Positive | 1967146 - 1967811 | 24854.5 |
| trna threonylcarbamoyladenosine dehydratase | EZ449_08220 | Not Available | Positive | 1967882 - 1968676 | 28873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

