Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdgsh iron-sulfur domain-containing protein | EZ449_08070 | Not Available | Positive | 1937215 - 1937439 | 8160.73 |
| gnat family n-acetyltransferase | EZ449_08075 | Not Available | Positive | 1937515 - 1937967 | 17300.6 |
| arac family transcriptional regulator | EZ449_08080 | Not Available | Negative | 1937996 - 1938799 | 31151.5 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_08085 | Not Available | Negative | 1938983 - 1939858 | 31873.9 |
| hypothetical protein | EZ449_08090 | Not Available | Positive | 1940014 - 1940223 | 7898.24 |
| marr family transcriptional regulator | EZ449_08095 | Not Available | Positive | 1940341 - 1940775 | 16275.9 |
| mfs transporter | EZ449_08100 | Not Available | Positive | 1940793 - 1942052 | 45810.1 |
| isochorismatase family protein | EZ449_08105 | Not Available | Positive | 1942057 - 1942617 | 20370.7 |
| transcriptional regulator | EZ449_08110 | Not Available | Positive | 1942899 - 1943291 | 15071.2 |
| glycoside hydrolase family 16 protein | EZ449_08120 | Not Available | Negative | 1944577 - 1945443 | 32429.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

