Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | EZ449_08020 | Not Available | Negative | 1922053 - 1923135 | 39458.2 |
| l,d-transpeptidase | EZ449_08025 | Not Available | Positive | 1923306 - 1924856 | 57780.1 |
| murein l,d-transpeptidase catalytic domain family protein | EZ449_08030 | Not Available | Negative | 1924863 - 1925672 | 29973.2 |
| serine/threonine protein kinase | EZ449_08035 | Not Available | Positive | 1926124 - 1927473 | 49825.6 |
| hypothetical protein | EZ449_08040 | Not Available | Positive | 1927520 - 1928473 | 36565.2 |
| serine/threonine-protein phosphatase | EZ449_08045 | Not Available | Positive | 1928568 - 1930013 | 52643.9 |
| cell cycle protein | EZ449_08050 | Not Available | Positive | 1930000 - 1934088 | 151323.0 |
| fha domain-containing protein | EZ449_08055 | Not Available | Positive | 1934247 - 1935038 | 29623.8 |
| serine/threonine protein kinase | EZ449_08060 | Not Available | Positive | 1935031 - 1936428 | 52190.1 |
| type vi secretion system tube protein hcp | EZ449_08065 | Not Available | Negative | 1936552 - 1937046 | 18398.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

