Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | EZ449_07970 | Not Available | Negative | 1914248 - 1915054 | 28812.4 |
| s41 family peptidase | EZ449_07975 | Not Available | Positive | 1915245 - 1916852 | 58722.9 |
| n-acetyltransferase | EZ449_07980 | Not Available | Positive | 1917037 - 1917546 | 19473.5 |
| gnat family n-acetyltransferase | EZ449_07985 | Not Available | Negative | 1917577 - 1918080 | 19625.5 |
| ribosome biogenesis gtpase der | EZ449_07990 | Not Available | Negative | 1918634 - 1919935 | 49094.3 |
| gtpase era | EZ449_07995 | Not Available | Negative | 1920066 - 1920962 | 34155.3 |
| Trna-met | Not Available | Not Available | Positive | 1921078 - 1921153 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1921216 - 1921287 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1921634 - 1921709 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1921741 - 1921812 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

