Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | EZ449_00680 | Not Available | Positive | 179508 - 180752 | 47016.9 |
| response regulator transcription factor | EZ449_00685 | Not Available | Negative | 180846 - 181535 | 26389.1 |
| hamp domain-containing histidine kinase | EZ449_00690 | Not Available | Negative | 181694 - 183367 | 63146.5 |
| s9 family peptidase | EZ449_00695 | Not Available | Negative | 183371 - 185257 | 71700.7 |
| tetratricopeptide repeat protein | EZ449_00700 | Not Available | Positive | 185486 - 187309 | 69530.7 |
| hypothetical protein | EZ449_00705 | Not Available | Negative | 187318 - 187968 | 24263.8 |
| gnat family n-acetyltransferase | EZ449_00710 | Not Available | Negative | 188031 - 188588 | 21562.6 |
| hypothetical protein | EZ449_00715 | Not Available | Negative | 188599 - 188862 | 9600.96 |
| duf4286 family protein | EZ449_00720 | Not Available | Positive | 188969 - 189271 | 11767.0 |
| pyrophosphatase | EZ449_00725 | Not Available | Negative | 189293 - 189619 | 12452.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

