Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | EZ449_07920 | Not Available | Positive | 1902544 - 1903482 | 33317.5 |
| threonine synthase | EZ449_07925 | Not Available | Positive | 1903666 - 1904973 | 48344.7 |
| hypothetical protein | EZ449_07930 | Not Available | Negative | 1904999 - 1905865 | 33211.2 |
| hypothetical protein | EZ449_07935 | Not Available | Negative | 1905944 - 1906498 | 21057.3 |
| tail fiber domain-containing protein | EZ449_07940 | Not Available | Negative | 1906598 - 1907017 | 15213.4 |
| hypothetical protein | EZ449_07945 | Not Available | Negative | 1907103 - 1907402 | 11240.6 |
| methylenetetrahydrofolate reductase | EZ449_07950 | Not Available | Negative | 1907527 - 1908480 | 35847.3 |
| methionine synthase | EZ449_07955 | Not Available | Negative | 1908628 - 1912356 | 138062.0 |
| bax inhibitor-1/ycca family protein | EZ449_07960 | Not Available | Negative | 1912699 - 1913454 | 27347.2 |
| hypothetical protein | EZ449_07965 | Not Available | Negative | 1913494 - 1914060 | 22922.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

