Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | EZ449_07870 | Not Available | Negative | 1890121 - 1891305 | 43317.8 |
| spor domain-containing protein | EZ449_07875 | Not Available | Negative | 1891292 - 1891732 | 17183.8 |
| type ii toxin-antitoxin system rele/pare family toxin | EZ449_07880 | Not Available | Negative | 1891840 - 1892133 | 11530.3 |
| hypothetical protein | EZ449_07885 | Not Available | Negative | 1892118 - 1892345 | 8460.08 |
| preprotein translocase subunit seca | EZ449_07890 | Not Available | Negative | 1892492 - 1895794 | 123805.0 |
| hypothetical protein | EZ449_07895 | Not Available | Negative | 1895935 - 1896234 | 11173.5 |
| dna mismatch repair protein muts | EZ449_07900 | Not Available | Negative | 1896397 - 1897347 | 35535.6 |
| ribosome small subunit-dependent gtpase a | EZ449_07905 | Not Available | Negative | 1897523 - 1898443 | 34286.2 |
| arac family transcriptional regulator | EZ449_07910 | Not Available | Positive | 1898766 - 1899212 | 16870.7 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | EZ449_07915 | Not Available | Positive | 1899890 - 1902334 | 89063.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

