Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EZ449_07815 | Not Available | Positive | 1875650 - 1876270 | 23059.9 |
| hypothetical protein | EZ449_07820 | Not Available | Positive | 1876487 - 1878802 | 82604.5 |
| hypothetical protein | EZ449_07825 | Not Available | Positive | 1878826 - 1881102 | 80926.0 |
| hypothetical protein | EZ449_07830 | Not Available | Positive | 1881050 - 1882447 | 53085.1 |
| duf4251 domain-containing protein | EZ449_07835 | Not Available | Positive | 1882550 - 1883083 | 19694.4 |
| glutaminyl-peptide cyclotransferase | EZ449_07840 | Not Available | Negative | 1883117 - 1884202 | 40138.1 |
| yran family protein | EZ449_07845 | Not Available | Negative | 1884180 - 1884545 | 14066.5 |
| dna primase | EZ449_07850 | Not Available | Negative | 1884655 - 1886640 | 74730.0 |
| g-d-s-l family lipolytic protein | EZ449_07855 | Not Available | Negative | 1886793 - 1887452 | 24285.5 |
| hypothetical protein | EZ449_07865 | Not Available | Negative | 1889100 - 1890041 | 36932.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

