Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bspa family leucine-rich repeat surface protein | EZ449_07715 | Not Available | Positive | 1858134 - 1858871 | 27909.5 |
| nad+ synthase | EZ449_07720 | Not Available | Negative | 1858928 - 1860568 | 60953.8 |
| port family protein | EZ449_07725 | Not Available | Negative | 1860599 - 1861273 | 24565.3 |
| gliding motility lipoprotein gldb | EZ449_07730 | Not Available | Positive | 1861380 - 1862411 | 40102.1 |
| patatin | EZ449_07735 | Not Available | Positive | 1862489 - 1863304 | 29487.3 |
| duf695 domain-containing protein | EZ449_07740 | Not Available | Negative | 1863313 - 1863813 | 20374.7 |
| 2-phosphosulfolactate phosphatase | EZ449_07745 | Not Available | Negative | 1863755 - 1864471 | 26427.7 |
| glycine cleavage system aminomethyltransferase gcvt | EZ449_07750 | Not Available | Negative | 1864555 - 1865634 | 39415.1 |
| atpase | EZ449_07755 | Not Available | Positive | 1865939 - 1866397 | 17736.0 |
| hypothetical protein | EZ449_07760 | Not Available | Positive | 1866460 - 1867014 | 20801.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

