Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | EZ449_07565 | Not Available | Negative | 1829384 - 1830052 | 25429.5 |
| esterase-like activity of phytase family protein | EZ449_07570 | Not Available | Negative | 1830148 - 1831320 | 44293.9 |
| hypothetical protein | EZ449_07575 | Not Available | Negative | 1831406 - 1832308 | 33018.4 |
| coce/nond family hydrolase | EZ449_07580 | Not Available | Positive | 1832502 - 1834370 | 70963.0 |
| coce/nond family hydrolase | EZ449_07585 | Not Available | Positive | 1834377 - 1836242 | 70874.7 |
| m1 family peptidase | EZ449_07590 | Not Available | Positive | 1836368 - 1838026 | 63219.7 |
| hypothetical protein | EZ449_07595 | Not Available | Positive | 1838256 - 1838516 | 9695.64 |
| ai-2e family transporter | EZ449_07600 | Not Available | Positive | 1838513 - 1839298 | 28208.8 |
| duf2807 domain-containing protein | EZ449_07605 | Not Available | Positive | 1839379 - 1840110 | 25155.8 |
| duf1572 domain-containing protein | EZ449_07610 | Not Available | Positive | 1840221 - 1840667 | 17089.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

