Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_07515 | Not Available | Negative | 1815961 - 1816410 | 16896.2 |
| fatty acid hydroxylase | EZ449_07520 | Not Available | Negative | 1816422 - 1816871 | 17829.2 |
| tetr/acrr family transcriptional regulator | EZ449_07525 | Not Available | Positive | 1817028 - 1817633 | 23120.5 |
| tolc family protein | EZ449_07530 | Not Available | Positive | 1817745 - 1819085 | 49780.6 |
| efflux rnd transporter periplasmic adaptor subunit | EZ449_07535 | Not Available | Positive | 1819088 - 1820155 | 38353.9 |
| efflux rnd transporter permease subunit | EZ449_07540 | Not Available | Positive | 1820240 - 1823434 | 116013.0 |
| hypothetical protein | EZ449_07545 | Not Available | Positive | 1823690 - 1824493 | 30048.7 |
| mfs transporter | EZ449_07550 | Not Available | Negative | 1824632 - 1825834 | 42824.7 |
| alkaline phosphatase | EZ449_07555 | Not Available | Negative | 1825973 - 1827511 | 54592.2 |
| dihydrolipoyl dehydrogenase | EZ449_07560 | Not Available | Negative | 1827874 - 1829280 | 49984.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

