Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | EZ449_00630 | Not Available | Positive | 169994 - 170545 | 19056.6 |
| duf3050 domain-containing protein | EZ449_00635 | Not Available | Positive | 170847 - 171638 | 30162.9 |
| cupin-like domain-containing protein | EZ449_00640 | Not Available | Positive | 171804 - 172682 | 33810.0 |
| sugar o-acetyltransferase | EZ449_00645 | Not Available | Positive | 173050 - 173652 | 22478.0 |
| nuclear transport factor 2 family protein | EZ449_00650 | Not Available | Negative | 173765 - 174190 | 16163.8 |
| carbohydrate kinase | EZ449_00655 | Not Available | Positive | 174277 - 175158 | 32285.7 |
| vwa domain-containing protein | EZ449_00660 | Not Available | Positive | 175594 - 176691 | 41532.5 |
| duf3861 family protein | EZ449_00665 | Not Available | Positive | 176734 - 177027 | 11224.5 |
| magnesium chelatase | EZ449_00670 | Not Available | Positive | 177112 - 178599 | 56052.1 |
| aaa family atpase | EZ449_00675 | Not Available | Positive | 178690 - 179448 | 28435.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

