Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EZ449_07415 | Not Available | Negative | 1791471 - 1794620 | 116479.0 |
| duf5007 domain-containing protein | EZ449_07420 | Not Available | Negative | 1794642 - 1795739 | 41572.4 |
| atp/gtp-binding protein | EZ449_07425 | Not Available | Negative | 1795776 - 1796885 | 41201.2 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_07430 | Not Available | Negative | 1796897 - 1798441 | 58358.8 |
| susc/raga family tonb-linked outer membrane protein | EZ449_07435 | Not Available | Negative | 1798441 - 1801437 | 112729.0 |
| sulp family inorganic anion transporter | EZ449_07440 | Not Available | Negative | 1801954 - 1803486 | 55094.6 |
| gnat family n-acetyltransferase | EZ449_07445 | Not Available | Positive | 1803705 - 1804205 | 18364.2 |
| duf4256 domain-containing protein | EZ449_07450 | Not Available | Negative | 1804236 - 1804802 | 21409.1 |
| esterase | EZ449_07455 | Not Available | Positive | 1804970 - 1805800 | 30632.6 |
| s58 family peptidase | EZ449_07460 | Not Available | Negative | 1806074 - 1807222 | 41283.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

