Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | EZ449_07365 | Not Available | Positive | 1774423 - 1776159 | 63687.1 |
| gluconate 2-dehydrogenase subunit 3 family protein | EZ449_07370 | Not Available | Positive | 1776161 - 1776793 | 23461.1 |
| hypothetical protein | EZ449_07375 | Not Available | Negative | 1776897 - 1779857 | 111562.0 |
| duf4965 domain-containing protein | EZ449_07380 | Not Available | Negative | 1780112 - 1782586 | 92273.1 |
| pkd domain-containing protein | EZ449_07385 | Not Available | Negative | 1783478 - 1784323 | 31602.5 |
| hypothetical protein | EZ449_07390 | Not Available | Negative | 1784337 - 1785776 | 52097.1 |
| duf4983 domain-containing protein | EZ449_07395 | Not Available | Negative | 1785809 - 1787512 | 63183.6 |
| duf5008 domain-containing protein | EZ449_07400 | Not Available | Negative | 1787545 - 1789164 | 58877.2 |
| hypothetical protein | EZ449_07405 | Not Available | Negative | 1789192 - 1789917 | 27648.1 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_07410 | Not Available | Negative | 1789936 - 1791459 | 57687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

