Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EZ449_07315 | Not Available | Negative | 1759868 - 1761472 | 58113.1 |
| tonb-dependent receptor | EZ449_07320 | Not Available | Negative | 1761486 - 1764458 | 107068.0 |
| laci family transcriptional regulator | EZ449_07325 | Not Available | Negative | 1764896 - 1765906 | 37874.1 |
| response regulator transcription factor | EZ449_07330 | Not Available | Positive | 1766234 - 1766593 | 13372.1 |
| hypothetical protein | EZ449_07335 | Not Available | Negative | 1766620 - 1766979 | 13907.5 |
| dna polymerase iv | EZ449_07340 | Not Available | Positive | 1767047 - 1768147 | 41054.5 |
| molecular chaperone dnak | EZ449_07345 | Not Available | Negative | 1768726 - 1770636 | 68315.8 |
| duf1304 domain-containing protein | EZ449_07350 | Not Available | Positive | 1771533 - 1771895 | 13374.9 |
| hypothetical protein | EZ449_07355 | Not Available | Positive | 1771904 - 1772479 | 21370.2 |
| sam-dependent methyltransferase | EZ449_07360 | Not Available | Negative | 1772926 - 1774131 | 45288.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

