Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EZ449_07265 | Not Available | Negative | 1742695 - 1746036 | 120292.0 |
| fecr family protein | EZ449_07270 | Not Available | Negative | 1746159 - 1747220 | 40452.4 |
| rna polymerase | EZ449_07275 | Not Available | Negative | 1747639 - 1748193 | 21841.2 |
| alpha-amylase | EZ449_07280 | Not Available | Negative | 1748323 - 1750209 | 70564.7 |
| mfs transporter | EZ449_07285 | Not Available | Negative | 1750320 - 1751696 | 50787.9 |
| alpha-amylase | EZ449_07290 | Not Available | Negative | 1751827 - 1753671 | 69561.8 |
| glycoside hydrolase family 65 protein | EZ449_07295 | Not Available | Negative | 1753668 - 1755986 | 88388.2 |
| beta-phosphoglucomutase | EZ449_07300 | Not Available | Negative | 1756107 - 1756787 | 24591.5 |
| alpha-amylase | EZ449_07305 | Not Available | Negative | 1756834 - 1758678 | 70195.8 |
| susf/suse family outer membrane protein | EZ449_07310 | Not Available | Negative | 1758851 - 1759849 | 34972.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

