Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2723 domain-containing protein | EZ449_07215 | Not Available | Positive | 1723928 - 1726954 | 114587.0 |
| duf2723 domain-containing protein | EZ449_07220 | Not Available | Positive | 1727183 - 1730221 | 114010.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EZ449_07225 | Not Available | Negative | 1730677 - 1731639 | 35836.4 |
| carboxypeptidase | EZ449_07230 | Not Available | Negative | 1732143 - 1733702 | 58657.9 |
| hypothetical protein | EZ449_07235 | Not Available | Negative | 1733848 - 1734228 | 13619.5 |
| duf5007 domain-containing protein | EZ449_07240 | Not Available | Negative | 1734253 - 1735314 | 39668.2 |
| hypothetical protein | EZ449_07245 | Not Available | Negative | 1735316 - 1736017 | 26326.9 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_07250 | Not Available | Negative | 1736029 - 1737498 | 55279.6 |
| susc/raga family tonb-linked outer membrane protein | EZ449_07255 | Not Available | Negative | 1737510 - 1740686 | 116492.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EZ449_07260 | Not Available | Negative | 1741095 - 1742675 | 58104.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

