Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | EZ449_07160 | Not Available | Negative | 1716258 - 1716602 | 12525.9 |
| hypothetical protein | EZ449_07165 | Not Available | Positive | 1716842 - 1717195 | 13539.2 |
| hypothetical protein | EZ449_07170 | Not Available | Positive | 1717192 - 1717836 | 25288.6 |
| hypothetical protein | EZ449_07175 | Not Available | Positive | 1717806 - 1718045 | 9123.94 |
| duf5063 domain-containing protein | EZ449_07180 | Not Available | Positive | 1718175 - 1718753 | 22642.3 |
| is66 family transposase | EZ449_07190 | Not Available | Negative | 1720497 - 1721654 | 44709.7 |
| 50s ribosomal protein l25/general stress protein ctc | EZ449_07195 | Not Available | Negative | 1722022 - 1722606 | 21243.1 |
| ribose-phosphate pyrophosphokinase | EZ449_07200 | Not Available | Negative | 1722625 - 1723575 | 34498.8 |
| Trna-gln | Not Available | Not Available | Positive | 1723650 - 1723723 | Not Available |
| hypothetical protein | EZ449_07205 | Not Available | Negative | 1723643 - 1723681 | 1499.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

