Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycxb family protein | EZ449_07110 | Not Available | Positive | 1702673 - 1703158 | 18529.6 |
| beta-xylosidase | EZ449_07115 | Not Available | Positive | 1703289 - 1704260 | 36699.6 |
| nadp-dependent isocitrate dehydrogenase | EZ449_07120 | Not Available | Negative | 1704506 - 1706725 | 79703.8 |
| ankyrin repeat domain-containing protein | EZ449_07125 | Not Available | Positive | 1707086 - 1708291 | 45734.4 |
| ankyrin repeat domain-containing protein | EZ449_07130 | Not Available | Positive | 1708288 - 1709487 | 45584.5 |
| hypothetical protein | EZ449_07135 | Not Available | Positive | 1709499 - 1710845 | 49170.4 |
| tetratricopeptide repeat protein | EZ449_07140 | Not Available | Positive | 1710953 - 1712044 | 42456.5 |
| hypothetical protein | EZ449_07145 | Not Available | Positive | 1712053 - 1712625 | 21943.7 |
| sorbosone dehydrogenase family protein | EZ449_07150 | Not Available | Positive | 1712759 - 1714081 | 47583.1 |
| tonb-dependent receptor | EZ449_07155 | Not Available | Positive | 1714159 - 1716207 | 76716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

