Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EZ449_07060 | Not Available | Positive | 1694805 - 1695509 | 24960.0 |
| 50s ribosomal protein l9 | EZ449_07065 | Not Available | Negative | 1695640 - 1696083 | 16091.4 |
| 30s ribosomal protein s18 | EZ449_07070 | Not Available | Negative | 1696097 - 1696360 | 10240.7 |
| 30s ribosomal protein s6 | EZ449_07075 | Not Available | Negative | 1696360 - 1696716 | 13471.3 |
| hypothetical protein | EZ449_07080 | Not Available | Negative | 1697173 - 1697769 | 22213.3 |
| arac family transcriptional regulator | EZ449_07085 | Not Available | Positive | 1697943 - 1698815 | 33192.8 |
| hypothetical protein | EZ449_07090 | Not Available | Positive | 1698843 - 1699379 | 21117.0 |
| dna polymerase iii subunit gamma/tau | EZ449_07095 | Not Available | Positive | 1699478 - 1701310 | 68436.7 |
| hypothetical protein | EZ449_07100 | Not Available | Positive | 1701313 - 1701822 | 18836.0 |
| hypothetical protein | EZ449_07105 | Not Available | Negative | 1701926 - 1702336 | 15264.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

