Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 1687062 - 1687136 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 1687219 - 1687291 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 1687418 - 1687490 | Not Available |
| 4fe-4s dicluster domain-containing protein | EZ449_07025 | Not Available | Positive | 1687718 - 1689013 | 48681.7 |
| (fe-s)-binding protein | EZ449_07030 | Not Available | Positive | 1689115 - 1689903 | 28885.0 |
| hypothetical protein | EZ449_07035 | Not Available | Negative | 1690064 - 1690534 | 18227.6 |
| abc transporter atpase | EZ449_07040 | Not Available | Positive | 1690585 - 1691064 | 18399.6 |
| gtp cyclohydrolase | EZ449_07045 | Not Available | Positive | 1691070 - 1691357 | 11029.4 |
| asma family protein | EZ449_07050 | Not Available | Positive | 1691453 - 1693876 | 88911.6 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EZ449_07055 | Not Available | Negative | 1693947 - 1694669 | 27664.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

