Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_06960 | Not Available | Negative | 1678855 - 1679322 | 17622.9 |
| response regulator transcription factor | EZ449_06965 | Not Available | Negative | 1679684 - 1680412 | 27557.5 |
| class c beta-lactamase-related serine hydrolase | EZ449_06970 | Not Available | Negative | 1680424 - 1681626 | 45884.1 |
| histidine kinase | EZ449_06975 | Not Available | Negative | 1681626 - 1682633 | 38897.8 |
| gnat family n-acetyltransferase | EZ449_06980 | Not Available | Negative | 1682728 - 1683210 | 17812.5 |
| hypothetical protein | EZ449_06985 | Not Available | Positive | 1683310 - 1683597 | 10710.7 |
| hypothetical protein | EZ449_06990 | Not Available | Positive | 1683714 - 1684316 | 21618.7 |
| hypothetical protein | EZ449_06995 | Not Available | Negative | 1684365 - 1685972 | 57833.0 |
| duf2256 domain-containing protein | EZ449_07000 | Not Available | Positive | 1686168 - 1686329 | 6402.86 |
| srpbcc domain-containing protein | EZ449_07005 | Not Available | Positive | 1686483 - 1686908 | 16029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

