Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | EZ449_00580 | Not Available | Positive | 156624 - 158846 | 83150.7 |
| excinuclease abc subunit c | EZ449_00585 | Not Available | Positive | 159027 - 160859 | 70288.9 |
| gliding motility protein gldn | EZ449_00590 | Not Available | Negative | 160937 - 161848 | 34598.4 |
| gliding motility protein gldm | EZ449_00595 | Not Available | Negative | 161852 - 163387 | 54864.0 |
| gliding motility protein gldl | EZ449_00600 | Not Available | Negative | 163431 - 164237 | 28469.8 |
| gliding motility-associated lipoprotein | EZ449_00605 | Not Available | Negative | 164286 - 165611 | 49623.1 |
| uroporphyrinogen-iii synthase | EZ449_00610 | Not Available | Negative | 165835 - 166605 | 29251.1 |
| duf4271 domain-containing protein | EZ449_00615 | Not Available | Negative | 166619 - 167596 | 37337.8 |
| radical sam family heme chaperone hemw | EZ449_00620 | Not Available | Positive | 167691 - 168821 | 42601.6 |
| sdr family oxidoreductase | EZ449_00625 | Not Available | Positive | 168915 - 169697 | 28519.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

