Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | EZ449_06855 | Not Available | Positive | 1650849 - 1651427 | 22003.5 |
| response regulator transcription factor | EZ449_06860 | Not Available | Negative | 1651583 - 1651957 | 13849.0 |
| hypothetical protein | EZ449_06865 | Not Available | Negative | 1652236 - 1652583 | 13126.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EZ449_06870 | Not Available | Positive | 1652857 - 1654383 | 55519.5 |
| rod shape-determining protein | EZ449_06875 | Not Available | Positive | 1655454 - 1656476 | 36761.0 |
| rod shape-determining protein mrec | EZ449_06880 | Not Available | Positive | 1656553 - 1657392 | 31173.8 |
| rod shape-determining protein mred | EZ449_06885 | Not Available | Positive | 1657385 - 1657900 | 19809.0 |
| penicillin-binding protein 2 | EZ449_06890 | Not Available | Positive | 1657900 - 1659909 | 74634.1 |
| rod shape-determining protein roda | EZ449_06895 | Not Available | Positive | 1659911 - 1661173 | 46746.6 |
| hypothetical protein | EZ449_06900 | Not Available | Negative | 1661305 - 1662492 | 44968.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

