Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease y | EZ449_06805 | Not Available | Negative | 1640734 - 1642305 | 58602.0 |
| cell division protein zapa | EZ449_06810 | Not Available | Negative | 1642610 - 1642900 | 11089.3 |
| hypothetical protein | EZ449_06815 | Not Available | Negative | 1642935 - 1643225 | 10795.2 |
| phenylalanine--trna ligase subunit beta | EZ449_06820 | Not Available | Negative | 1643257 - 1645656 | 88069.4 |
| hypothetical protein | EZ449_06825 | Not Available | Negative | 1645975 - 1646169 | 6848.98 |
| radical sam protein | EZ449_06830 | Not Available | Negative | 1646363 - 1647757 | 53622.6 |
| diacylglyceryl transferase | EZ449_06835 | Not Available | Negative | 1647750 - 1648520 | 29385.9 |
| endonuclease/exonuclease/phosphatase family protein | EZ449_06840 | Not Available | Negative | 1648532 - 1649368 | 31529.9 |
| dna repair protein radc | EZ449_06845 | Not Available | Negative | 1649579 - 1650277 | 26012.2 |
| 30s ribosomal protein s20 | EZ449_06850 | Not Available | Negative | 1650351 - 1650605 | 9602.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

