Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 1623331 - 1623402 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1623480 - 1623555 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1623644 - 1623726 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 1623764 - 1623836 | Not Available |
| ribosome-associated translation inhibitor raia | EZ449_06725 | Not Available | Negative | 1624068 - 1624415 | 13059.6 |
| integrase | EZ449_06730 | Not Available | Negative | 1624430 - 1625314 | 33994.1 |
| 30s ribosomal protein s21 | EZ449_06735 | Not Available | Negative | 1625472 - 1625666 | 7540.27 |
| hypothetical protein | EZ449_06740 | Not Available | Positive | 1625837 - 1626211 | 14090.2 |
| acyl-coa dehydrogenase | EZ449_06745 | Not Available | Negative | 1626347 - 1627498 | 41693.9 |
| hypothetical protein | EZ449_06750 | Not Available | Negative | 1627953 - 1628852 | 34773.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

