Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | EZ449_06655 | Not Available | Negative | 1610402 - 1614688 | 159639.0 |
| dna-directed rna polymerase subunit beta | EZ449_06660 | Not Available | Negative | 1614779 - 1618582 | 142131.0 |
| 50s ribosomal protein l7/l12 | EZ449_06665 | Not Available | Negative | 1618740 - 1619117 | 12823.5 |
| 50s ribosomal protein l10 | EZ449_06670 | Not Available | Negative | 1619181 - 1619702 | 18908.7 |
| 50s ribosomal protein l1 | EZ449_06675 | Not Available | Negative | 1619705 - 1620403 | 24444.8 |
| 50s ribosomal protein l11 | EZ449_06680 | Not Available | Negative | 1620424 - 1620867 | 15610.0 |
| transcription termination/antitermination factor nusg | EZ449_06685 | Not Available | Negative | 1621012 - 1621551 | 20381.0 |
| preprotein translocase subunit sece | EZ449_06690 | Not Available | Negative | 1621561 - 1621758 | 7291.92 |
| Trna-trp | Not Available | Not Available | Positive | 1621867 - 1621937 | Not Available |
| elongation factor tu | EZ449_06700 | Not Available | Negative | 1622018 - 1623205 | 42885.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

