Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | EZ449_06605 | Not Available | Positive | 1600556 - 1601761 | 45639.2 |
| duf4136 domain-containing protein | EZ449_06610 | Not Available | Negative | 1601768 - 1602328 | 20816.0 |
| threonylcarbamoyl-amp synthase | EZ449_06615 | Not Available | Positive | 1602522 - 1603088 | 20911.1 |
| hd domain-containing protein | EZ449_06620 | Not Available | Positive | 1603172 - 1604626 | 55062.3 |
| hypothetical protein | EZ449_06625 | Not Available | Positive | 1604724 - 1605368 | 24645.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EZ449_06630 | Not Available | Positive | 1605442 - 1606350 | 34653.7 |
| g-d-s-l family lipolytic protein | EZ449_06635 | Not Available | Negative | 1606405 - 1607691 | 45031.6 |
| long-chain fatty acid transporter | EZ449_06640 | Not Available | Negative | 1607703 - 1608926 | 44021.2 |
| duf3467 domain-containing protein | EZ449_06645 | Not Available | Negative | 1609004 - 1609315 | 11530.8 |
| glycoside hydrolase family 16 protein | EZ449_06650 | Not Available | Negative | 1609407 - 1610198 | 30615.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

