Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | EZ449_06505 | Not Available | Negative | 1577954 - 1579162 | 43229.7 |
| thioredoxin | EZ449_06510 | Not Available | Negative | 1579315 - 1579635 | 11733.3 |
| dna polymerase iii subunit alpha | EZ449_06515 | Not Available | Negative | 1579801 - 1584234 | 167088.0 |
| hypothetical protein | EZ449_06520 | Not Available | Positive | 1584689 - 1585132 | 16678.7 |
| carboxypeptidase-like regulatory domain-containing protein | EZ449_06525 | Not Available | Positive | 1585555 - 1586691 | 42986.8 |
| hypothetical protein | EZ449_06530 | Not Available | Negative | 1586828 - 1587283 | 17925.1 |
| malate dehydrogenase | EZ449_06535 | Not Available | Positive | 1587528 - 1588466 | 32993.2 |
| hypothetical protein | EZ449_06540 | Not Available | Positive | 1588625 - 1589050 | 15846.4 |
| polyketide cyclase | EZ449_06545 | Not Available | Positive | 1589340 - 1589879 | 20012.3 |
| response regulator transcription factor | EZ449_06550 | Not Available | Positive | 1590048 - 1590725 | 25132.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

