Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | EZ449_06455 | Not Available | Negative | 1566767 - 1567654 | 32612.5 |
| fumarylacetoacetate hydrolase family protein | EZ449_06460 | Not Available | Negative | 1567972 - 1568967 | 36811.1 |
| hypothetical protein | EZ449_06465 | Not Available | Negative | 1569034 - 1569489 | 16265.2 |
| homogentisate 1,2-dioxygenase | EZ449_06470 | Not Available | Positive | 1569762 - 1570928 | 44851.2 |
| 4-hydroxyphenylpyruvate dioxygenase | EZ449_06475 | Not Available | Positive | 1571140 - 1572270 | 42520.4 |
| ubiquinone-dependent pyruvate dehydrogenase | EZ449_06480 | Not Available | Negative | 1572492 - 1574228 | 63109.4 |
| hypothetical protein | EZ449_06485 | Not Available | Positive | 1574559 - 1575506 | 35823.7 |
| dsba family protein | EZ449_06490 | Not Available | Negative | 1575507 - 1576025 | 19109.0 |
| redoxin domain-containing protein | EZ449_06495 | Not Available | Negative | 1576031 - 1576492 | 17221.5 |
| duf58 domain-containing protein | EZ449_06500 | Not Available | Negative | 1576572 - 1577489 | 35376.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

