Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cap domain-containing protein | EZ449_06405 | Not Available | Positive | 1558077 - 1558766 | 26732.0 |
| catalase | EZ449_06410 | Not Available | Positive | 1558902 - 1560422 | 57779.8 |
| gtra family protein | EZ449_06415 | Not Available | Positive | 1560517 - 1561017 | 19377.2 |
| aromatic amino acid hydroxylase | EZ449_06420 | Not Available | Positive | 1561466 - 1563244 | 67018.7 |
| type ii toxin-antitoxin system vapc family toxin | EZ449_06425 | Not Available | Positive | 1563457 - 1563819 | 13327.3 |
| sdr family oxidoreductase | EZ449_06430 | Not Available | Positive | 1563863 - 1564564 | 25088.6 |
| hypothetical protein | EZ449_06435 | Not Available | Positive | 1564621 - 1565007 | 14441.6 |
| hypothetical protein | EZ449_06440 | Not Available | Positive | 1565110 - 1565472 | 13396.8 |
| nlpc/p60 family protein | EZ449_06445 | Not Available | Positive | 1565591 - 1566139 | 19851.0 |
| hypothetical protein | EZ449_06450 | Not Available | Negative | 1566141 - 1566743 | 23216.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

