Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_06305 | Not Available | Negative | 1533643 - 1534350 | 26182.3 |
| duf4397 domain-containing protein | EZ449_06310 | Not Available | Negative | 1534410 - 1535081 | 24238.7 |
| dna polymerase iii subunit beta | EZ449_06315 | Not Available | Negative | 1535164 - 1536288 | 41316.4 |
| gliding motility-associated abc transporter substrate-binding protein gldg | EZ449_06320 | Not Available | Negative | 1536322 - 1538007 | 62608.8 |
| gliding motility-associated abc transporter permease subunit gldf | EZ449_06325 | Not Available | Negative | 1538007 - 1538732 | 27011.5 |
| hypothetical protein | EZ449_06330 | Not Available | Negative | 1538775 - 1539548 | 29381.7 |
| calcium:sodium exchange protein | EZ449_06335 | Not Available | Positive | 1539683 - 1540735 | 40639.4 |
| port family protein | EZ449_06340 | Not Available | Negative | 1540789 - 1541457 | 23676.7 |
| port family protein | EZ449_06345 | Not Available | Negative | 1541565 - 1542260 | 24131.3 |
| hypothetical protein | EZ449_06350 | Not Available | Negative | 1542473 - 1543015 | 19509.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

