Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | EZ449_06255 | Not Available | Positive | 1523180 - 1524211 | 38282.9 |
| duf4395 domain-containing protein | EZ449_06260 | Not Available | Negative | 1525142 - 1525582 | 16147.6 |
| hypothetical protein | EZ449_06265 | Not Available | Positive | 1525697 - 1526257 | 21176.5 |
| duf2339 domain-containing protein | EZ449_06270 | Not Available | Positive | 1526376 - 1528751 | 89980.6 |
| duf3999 family protein | EZ449_06275 | Not Available | Positive | 1528726 - 1529961 | 47637.8 |
| duf695 domain-containing protein | EZ449_06280 | Not Available | Positive | 1529973 - 1531064 | 42182.7 |
| duf1569 domain-containing protein | EZ449_06285 | Not Available | Positive | 1531071 - 1531523 | 17642.2 |
| hypothetical protein | EZ449_06290 | Not Available | Positive | 1531530 - 1531892 | 13180.5 |
| s1/p1 nuclease | EZ449_06295 | Not Available | Positive | 1531913 - 1532869 | 36899.3 |
| hypothetical protein | EZ449_06300 | Not Available | Negative | 1532892 - 1533575 | 25795.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

