Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_06205 | Not Available | Positive | 1510066 - 1510668 | 22414.7 |
| hypothetical protein | EZ449_06210 | Not Available | Positive | 1510679 - 1512772 | 78031.5 |
| hypothetical protein | EZ449_06215 | Not Available | Negative | 1512784 - 1512978 | 7409.9 |
| duf1080 domain-containing protein | EZ449_06220 | Not Available | Negative | 1513076 - 1513771 | 26875.2 |
| fad-dependent oxidoreductase | EZ449_06225 | Not Available | Negative | 1513886 - 1515571 | 62989.5 |
| acyltransferase | EZ449_06230 | Not Available | Positive | 1515954 - 1517036 | 40928.3 |
| hypothetical protein | EZ449_06235 | Not Available | Negative | 1517288 - 1517854 | 22314.9 |
| hypothetical protein | EZ449_06240 | Not Available | Negative | 1518003 - 1521107 | 117556.0 |
| response regulator transcription factor | EZ449_06245 | Not Available | Negative | 1521171 - 1521893 | 27285.1 |
| serine acetyltransferase | EZ449_06250 | Not Available | Positive | 1522395 - 1523033 | 23610.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

