Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EZ449_06005 | Not Available | Negative | 1458144 - 1458506 | 13693.1 |
| dna polymerase iii subunit delta | EZ449_06010 | Not Available | Negative | 1458597 - 1459619 | 38561.7 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | EZ449_06015 | Not Available | Positive | 1459745 - 1460203 | 17811.1 |
| gfo/idh/moca family oxidoreductase | EZ449_06020 | Not Available | Negative | 1461064 - 1462257 | 44352.3 |
| duf1080 domain-containing protein | EZ449_06025 | Not Available | Negative | 1462257 - 1463621 | 50338.2 |
| gfo/idh/moca family oxidoreductase | EZ449_06030 | Not Available | Negative | 1463721 - 1465076 | 50511.9 |
| valine--trna ligase | EZ449_06035 | Not Available | Negative | 1465746 - 1468436 | 103254.0 |
| uma2 family endonuclease | EZ449_06040 | Not Available | Negative | 1468952 - 1469536 | 22071.4 |
| cadmium-translocating p-type atpase | EZ449_06045 | Not Available | Negative | 1469743 - 1471725 | 71828.8 |
| m13 family peptidase | EZ449_06050 | Not Available | Positive | 1472298 - 1474334 | 75691.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

