Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EZ449_05955 | Not Available | Negative | 1432428 - 1434218 | 67219.1 |
| tonb-dependent receptor | EZ449_05960 | Not Available | Negative | 1434239 - 1437346 | 114254.0 |
| glucose dehydrogenase | EZ449_05965 | Not Available | Negative | 1438884 - 1440056 | 43171.4 |
| glycoside hydrolase family 2 | EZ449_05970 | Not Available | Negative | 1440162 - 1442915 | 103498.0 |
| duf4981 domain-containing protein | EZ449_05975 | Not Available | Negative | 1443082 - 1446267 | 119861.0 |
| hybrid sensor histidine kinase/response regulator | EZ449_05980 | Not Available | Positive | 1446678 - 1450853 | 158608.0 |
| response regulator | EZ449_05985 | Not Available | Negative | 1451618 - 1451962 | 12420.2 |
| pas domain s-box protein | EZ449_05990 | Not Available | Negative | 1452477 - 1454471 | 75168.7 |
| hypothetical protein | EZ449_05995 | Not Available | Positive | 1455269 - 1456567 | 46799.4 |
| hypothetical protein | EZ449_06000 | Not Available | Positive | 1456844 - 1457089 | 9796.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

