Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_05900 | Not Available | Positive | 1420690 - 1421055 | 13398.2 |
| arac family transcriptional regulator | EZ449_05905 | Not Available | Positive | 1421067 - 1421840 | 30185.6 |
| dna-binding protein | EZ449_05910 | Not Available | Negative | 1422669 - 1422905 | 9300.42 |
| pas domain-containing sensor histidine kinase | EZ449_05920 | Not Available | Negative | 1423559 - 1425031 | 56231.6 |
| alpha/beta hydrolase | EZ449_05925 | Not Available | Negative | 1425043 - 1425843 | 29539.0 |
| xre family transcriptional regulator | EZ449_05930 | Not Available | Negative | 1425939 - 1426247 | 11774.3 |
| cold-shock protein | EZ449_05935 | Not Available | Negative | 1426435 - 1426641 | 7697.41 |
| 9-o-acetylesterase | EZ449_05940 | Not Available | Negative | 1428273 - 1429694 | 53112.9 |
| beta-xylosidase | EZ449_05945 | Not Available | Negative | 1429758 - 1431341 | 58928.6 |
| duf1735 domain-containing protein | EZ449_05950 | Not Available | Negative | 1431411 - 1432400 | 36030.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

