Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | EZ449_05845 | Not Available | Negative | 1409170 - 1409748 | 22380.0 |
| luxr family transcriptional regulator | EZ449_05850 | Not Available | Negative | 1409804 - 1410598 | 30477.2 |
| duf1349 domain-containing protein | EZ449_05855 | Not Available | Positive | 1410673 - 1411320 | 25110.1 |
| glycoside hydrolase family 92 protein | EZ449_05860 | Not Available | Positive | 1411450 - 1413729 | 86549.4 |
| mbl fold metallo-hydrolase | EZ449_05865 | Not Available | Negative | 1414053 - 1414856 | 29829.0 |
| rrf2 family transcriptional regulator | EZ449_05875 | Not Available | Negative | 1415634 - 1416038 | 14625.9 |
| atp-binding protein | EZ449_05880 | Not Available | Positive | 1416514 - 1417014 | 18985.9 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_05885 | Not Available | Positive | 1417457 - 1418332 | 31924.8 |
| arac family transcriptional regulator | EZ449_05890 | Not Available | Positive | 1418398 - 1419315 | 34927.9 |
| aldehyde reductase | EZ449_05895 | Not Available | Positive | 1419653 - 1420693 | 38420.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

